Single-Cell Bioinformatics Software and Services Market Size, Share & Trends Analysis Report By Product, By Application (Oncology, Immunology, Neurology, Non-invasive Prenatal Diagnosis (NIPD), Microbiology, Other Applications), By End-User, By Region, And By Segment Forecasts, 2025-2034

Report Id: 1347 Pages: 185 Published: 14 May 2025 Format: PDF / PPT / Excel / Power BI
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Global Single-Cell Bioinformatics Software and Services Market Size is valued at USD 294.4 Million in 2024 and is predicted to reach USD 802.8 Million by the year 2034 at a 10.6% CAGR during the forecast period for 2025-2034.

Key Industry Insights & Findings from the Report:

  • Government and private investments in life sciences research, particularly in areas related to understanding complex biological systems at the single-cell level, are contributing to the growth of the market.
  • Bioinformatics platforms that facilitate the integration and analysis of multi-omics data at the single-cell level are in high demand, driving market growth.
  • North America dominated the market and accounted for a global revenue share in 2024.
  • With the availability of bioinformatics software for single-cell analysis, many tools require expertise in programming and computational biology, which might pose a barrier to adoption for researchers without specialized training.

Single-Cell Bioinformatics Software and Services Market

The single-Cell bioinformatics tool enables researchers to easily identify and explore subpopulations and differentially expressed genes while generating publication-ready figures. The sequencing software provides transcriptional profiling of numerous individual cells. This level of comprehensive throughput analysis enables researchers to comprehend, at the level of a single cell, which genes are expressed, in what amounts, and how they vary across thousands of cells in a heterogeneous sample. It will detect single-Cells genomes, transcriptomes, and other multi-omics. The software can show the differences and evolutionary relationships of various cells.

Factors responsible for the market growth are fast development in Single-Cell Technologies and Advancements in disease diagnosis and drug Discovery. In addition, biopharmaceutical companies are continuously investing in single-Cell sequencing research. Developers are updating their technologies for more detailed and user-friendly, which will boost the rapid growth of the single-Cell bioinformatics software and services market. In Jan 2022, Illumina Enters Co-Development Partnership with SomaLogic will Accelerate Next-Generation Sequencing into the Fastest-Growing Area of the Proteomics Market with Ultra-high Throughput, Ultra-high Plexity Workflow. The competition in sequencing software services is boosting the market's growth due to decreasing sequencing costs.

However, Barriers to Carry Out Effective Single-Cell Analysis, Analytical Challenges in Metabolite Analysis, and Lack of Spatial-Temporal Context are market growth restrainers. High capital requirements and lack of infrastructure and expertise are challenges in front of the single-Cell bioinformatics services market. On the other hand, the market also has some opportunities in the coming years as expansions continuously go into new research applications and product portfolios.

Competitive Landscape

Some Major Key Players In The Single-Cell Bioinformatics Software And Services Market:

  • Illumina, Inc.,
  • QIAGEN N.V.,
  • BD,
  • PacBio,
  • Fluidigm Corporation,
  • NanoString,
  • Takara Bio Inc.,
  • BGI,
  • Oxford Nanopore Technologies plc.,
  • Partek Incorporated,
  • Akoya Biosciences, Inc.,
  • IsoPlexis,
  • Scipio Bioscience,
  • Scailyte,
  • BioBam Spain,

Market Segmentation

Products, applications, and end-user are the segments covered in the Global Single-Cell Bioinformatics Software and Services Market. The product segment includes bioinformatics software and bioinformatics services, which the software market will lead the segment due to competition in service providers. By application, this bioinformatics market is divided into Oncology, Immunology, Neurology, Non-invasive Prenatal Diagnosis (NIPD), Microbiology, and Other Applications. Oncological applications are increasing as several patients have cancer. Research and Academic Institutes, Biopharmaceutical Companies, and Others are subsegments of the End-User segment.

North America and Europe generate the highest revenue due to research and development advancements in the single-cell analysis services market. The demand for single-Cell RNA sequencing is more elevated in European countries, which will continue in the coming forecasting years.

Recent Developments:

  • In April 2024, Takara Bio USA, Inc., the ShastaTM Single-Cell System a fully owned subsidiary of Takara Bio Inc.—was introduced. It is an automated, high-throughput NGS solution with well-validated chemistry and user-friendly bioinformatics tools that facilitate the discovery of novel biomarkers for oncology research.

Single-Cell Bioinformatics Software and Services Market Report Scope

Report Attribute Specifications
Market Size Value In 2024 USD 294.4 Million
Revenue Forecast In 2034 USD 802.8 Million
Growth Rate CAGR CAGR of 10.6% from 2025 to 2034
Quantitative Units Representation of revenue in US$ Mn,and CAGR from 2025 to 2034
Historic Year 2021 to 2024
Forecast Year 2025-2034
Report Coverage The forecast of revenue, the position of the company, the competitive market structure, growth prospects, and trends
Segments Covered Product, Application, End-User
Regional Scope North America; Europe; Asia Pacific; Latin America; Middle East & Africa
Country Scope U.S.; Canada; U.K.; Germany; China; India; Japan; Brazil; Mexico ;The UK; France; Italy; Spain; China; Japan; India; South Korea; South East Asia; South Korea; South East Asia
Competitive Landscape Illumina, Inc., QIAGEN N.V., BD., PacBio, Fluidigm Corporation, NanoString, Takara Bio Inc., BGI, Oxford Nanopore Technologies plc., Partek, Incorporated, Akoya Biosciences, Inc., IsoPlexis, Scipio Bioscience, Scailyte, BioBam Spain, and other.
Customization Scope Free customization report with the procurement of the report, Modifications to the regional and segment scope. Particular Geographic competitive landscape.
Pricing And Available Payment Methods Explore pricing alternatives that are customized to your particular study requirements.

Segmentation Of Single-Cell Bioinformatics Software And Services Market

Global Single-Cell Bioinformatics Software and Services Market , by Product

  • Bioinformatics Software
  • Bioinformatics Services

single cell bioinformatics

Global Single-Cell Bioinformatics Software and Services Market , by Application,

  • Oncology
  • Immunology
  • Neurology
  • Non-invasive Prenatal Diagnosis (NIPD)
  • Microbiology
  • Other Applications

Global Single-Cell Bioinformatics Software and Services Market , by End-Users

  • Research and Academic Institutes
  • Biopharmaceutical Companies
  • Others

Global Single-Cell Bioinformatics Software and Services Market , by Region,

  • North America
  • Europe
  • Asia Pacific
  • Latin America
  • Middle East & Africa

North America Single-Cell Bioinformatics Software and Services Market , by Country

  • U.S.
  • Canada

Europe Single-Cell Bioinformatics Software and Services Market , by Country,

  • Germany
  • France
  • Italy
  • Spain
  • Russia
  • Rest of Europe

Asia Pacific Single-Cell Bioinformatics Software and Services Market , by Country

  • India
  • China
  • Japan
  • South Korea
  • Australia & New Zealand

Latin America Single-Cell Bioinformatics Software and Services Market , by Country

  • Brazil
  • Mexico
  • Rest of Latin America

Middle East & Africa Single-Cell Bioinformatics Software and Services Market , by Country

  • GCC Countries
  • South Africa
  • Rest of Middle East & Africa

Need specific information/chapter from the report of the custom data table, graph or complete report? Tell us more.

Chapter 1. Methodology and Scope

1.1. Research Methodology

1.2. Research Scope & Assumptions

Chapter 2. Executive Summary

Chapter 3. Global Single-Cell Bioinformatics Software and Services Market Snapshot

Chapter 4. Global Single-Cell Bioinformatics Software and Services Market Variables, Trends & Scope

4.1. Market Segmentation & Scope

4.2. Drivers

4.3. Challenges

4.4. Trends

4.5. Investment and Funding Analysis

4.6. Industry Analysis – Porter’s Five Forces Analysis

4.7. Competitive Landscape & Market Share Analysis

4.8. Impact of Covid-19 Analysis

Chapter 5. Market Segmentation 1: By Product Estimates & Trend Analysis

5.1. By Product & Market Share, 2024 & 2034

5.2. Market Size (Value US$ Mn) & Forecasts and Trend Analyses, 2021 to 2034 for the following By Product:

5.2.1. Bioinformatics Software

5.2.2. Bioinformatics Services

Chapter 6. Market Segmentation 2: By Application Estimates & Trend Analysis

6.1. By Application & Market Share, 2024 & 2034

6.2. Market Size (Value US$ Mn) & Forecasts and Trend Analyses, 2021 to 2034 for the following By Application:

6.2.1. Oncology

6.2.2. Immunology

6.2.3. Neurology

6.2.4. Non-invasive Prenatal Diagnosis (NIPD)

6.2.5. Microbiology

6.2.6. Other Applications

Chapter 7. Market Segmentation 3: By End-user Estimates & Trend Analysis

7.1. By End-user & Market Share, 2024 & 2034

7.2. Market Size (Value US$ Mn) & Forecasts and Trend Analyses, 2021 to 2034 for the following By End-user:

7.2.1. Research and Academic Institutes

7.2.2. Biopharmaceutical Companies

7.2.3. Others

Chapter 8. Single-Cell Bioinformatics Software and Services Market Segmentation 4: Regional Estimates & Trend Analysis

8.1. North America

8.1.1. North America Single-Cell Bioinformatics Software and Services Market revenue (US$ Million) estimates and forecasts By Product, 2021-2034

8.1.2. North America Single-Cell Bioinformatics Software and Services Market revenue (US$ Million) estimates and forecasts By Application, 2021-2034

8.1.3. North America Single-Cell Bioinformatics Software and Services Market revenue (US$ Million) estimates and forecasts by End-user, 2021-2034

8.1.4. North America Single-Cell Bioinformatics Software and Services Market revenue (US$ Million) estimates and forecasts by country, 2021-2034

8.2. Europe

8.2.1. Europe Single-Cell Bioinformatics Software and Services Market revenue (US$ Million) By Product, 2021-2034

8.2.2. Europe Single-Cell Bioinformatics Software and Services Market revenue (US$ Million) By Application, 2021-2034

8.2.3. Europe Single-Cell Bioinformatics Software and Services Market revenue (US$ Million) estimates and forecasts by End-user, 2021-2034

8.2.4. Europe Single-Cell Bioinformatics Software and Services Market revenue (US$ Million) by country, 2021-2034

8.3. Asia Pacific

8.3.1. Asia Pacific Single-Cell Bioinformatics Software and Services Market revenue (US$ Million) By Product, 2021-2034

8.3.2. Asia Pacific Single-Cell Bioinformatics Software and Services Market revenue (US$ Million) By Application, 2021-2034

8.3.3. Asia Pacific Single-Cell Bioinformatics Software and Services Market revenue (US$ Million) estimates and forecasts by End-user, 2021-2034

8.3.4. Asia Pacific Single-Cell Bioinformatics Software and Services Market revenue (US$ Million) by country, 2021-2034

8.4. Latin America

8.4.1. Latin America Single-Cell Bioinformatics Software and Services Market revenue (US$ Million) By Product, (US$ Million) 2021-2034

8.4.2. Latin America Single-Cell Bioinformatics Software and Services Market revenue (US$ Million) By Application, (US$ Million) 2021-2034

8.4.3. Latin America Single-Cell Bioinformatics Software and Services Market revenue (US$ Million) estimates and forecasts by End-user, 2021-2034

8.4.4. Latin America Single-Cell Bioinformatics Software and Services Market revenue (US$ Million) by country, 2021-2034

8.5. Middle East & Africa

8.5.1. Middle East & Africa Single-Cell Bioinformatics Software and Services Market revenue (US$ Million) By Product 2021-2034

8.5.2. Middle East & Africa Single-Cell Bioinformatics Software and Services Market revenue (US$ Million) By Application 2021-2034

8.5.3. Middle East & Africa Single-Cell Bioinformatics Software and Services Market revenue (US$ Million) estimates and forecasts by End-user, 2021-2034

8.5.4. Middle East & Africa Single-Cell Bioinformatics Software and Services Market revenue (US$ Million) by country, 2021-2034

Chapter 9. Competitive Landscape

9.1. Major Mergers and Acquisitions/Strategic Alliances

9.2. Company Profiles

 9.2.1. Illumina, Inc.

9.2.2. QIAGEN N.V.

9.2.3. BD.

9.2.4. PacBio

9.2.5. Fluidigm Corporation

9.2.6. NanoString

9.2.7. Takara Bio Inc.

9.2.8. BGI

9.2.9. Oxford Nanopore Technologies plc.

9.2.10. Partek, Incorporated

9.2.11. Akoya Biosciences, Inc.

9.2.12. IsoPlexis

9.2.13. Scipio Bioscience

9.2.14.  Scailyte    

9.2.15.  BioBam Spain

9.2.16.  Other Prominent Players

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Frequently Asked Questions

Illumina, Inc., QIAGEN N.V., BD., PacBio, Fluidigm Corporation, NanoString, Takara Bio Inc., BGI, Oxford Nanopore Technologies plc., Partek, others

Single-Cell Bioinformatics Software and Services Market Size is valued at USD 294.4 Million in 2024 and is predicted to reach USD 802.8 Million by the

Single-Cell Bioinformatics Software and Services Market is expected to grow at a 10.6% CAGR during the forecast period for 2025-2034.

Product, Application and End-User are the key segments of the Single-Cell Bioinformatics Software and Services Market.

North America region is leading the Single-Cell Bioinformatics Software and Services Market.
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